Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB6Q9Y5F9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB6Q9Y5F9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB6Q9Y5F9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB6Q9Y5F9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB6Q9Y5F9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB6Q9Y5F9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB6Q9Y5F9 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 AL513480.1-201ENST00000451731 511 ntBASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 SLC25A6P2-201ENST00000497974 877 ntBASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 AC112191.1-201ENST00000523689 701 ntBASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 REXO1L3P-201ENST00000622202 1288 ntBASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB6Q9Y5F9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 AP002472.1-201ENST00000577490 586 ntBASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 AC024909.3-201ENST00000611513 2257 ntBASIC15.59■□□□□ 0.09
PCDHGB6Q9Y5F9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms