Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
PCDHB1Q9Y5F3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 AC002056.1-201ENST00000395613 760 ntBASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 AC005237.2-201ENST00000434368 219 ntBASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 AC099522.2-201ENST00000607001 744 ntBASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHB1Q9Y5F3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 AL671277.1-201ENST00000429656 993 ntBASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 AC109635.5-201ENST00000533593 962 ntBASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 AJ011932.1-201ENST00000621707 465 ntBASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 MTHFR-217ENST00000641820 1569 ntBASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHB1Q9Y5F3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHB1Q9Y5F3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms