Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
AP4S1Q9Y587 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 SNORA78-201ENST00000459373 127 ntBASIC15.59■□□□□ 0.09
AP4S1Q9Y587 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 AC011840.4-201ENST00000578471 627 ntBASIC15.59■□□□□ 0.09
AP4S1Q9Y587 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 TERC-201ENST00000602385 541 ntBASIC15.59■□□□□ 0.09
AP4S1Q9Y587 AC011558.1-201ENST00000623459 338 ntBASIC15.59■□□□□ 0.09
AP4S1Q9Y587 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 AC243591.1-201ENST00000452967 1364 ntBASIC15.59■□□□□ 0.09
AP4S1Q9Y587 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
AP4S1Q9Y587 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
AP4S1Q9Y587 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
AP4S1Q9Y587 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
AP4S1Q9Y587 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
AP4S1Q9Y587 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
AP4S1Q9Y587 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 AP003680.1-201ENST00000598970 3660 ntBASIC15.58■□□□□ 0.08
AP4S1Q9Y587 OR2I1P-210ENST00000642037 4691 ntBASIC15.58■□□□□ 0.08
AP4S1Q9Y587 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 GPAA1P2-202ENST00000606848 1787 ntBASIC15.58■□□□□ 0.08
AP4S1Q9Y587 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 AL845331.1-201ENST00000424978 1190 ntBASIC15.58■□□□□ 0.08
AP4S1Q9Y587 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 VENTXP5-201ENST00000523979 775 ntBASIC15.58■□□□□ 0.08
AP4S1Q9Y587 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 TOP3BP1-201ENST00000420768 1380 ntBASIC15.58■□□□□ 0.08
AP4S1Q9Y587 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
AP4S1Q9Y587 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms