Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 AK4P3-201ENST00000418260 669 ntBASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 DUX4L26-201ENST00000489078 1255 ntBASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 COX11P1-201ENST00000489116 835 ntBASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRCH1Q9Y2L9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 AC006011.2-201ENST00000621313 1158 ntBASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 CR769767.2-201ENST00000622735 460 ntBASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 AL161772.1-201ENST00000610494 4412 ntBASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRCH1Q9Y2L9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 AC104076.2-201ENST00000448912 469 ntBASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 AC112698.1-201ENST00000510299 916 ntBASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 NEK4P2-201ENST00000580004 1012 ntBASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.68■□□□□ 0.1
LRCH1Q9Y2L9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms