Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 AC002056.1-201ENST00000395613 760 ntBASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 AL355306.1-201ENST00000415580 579 ntBASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 Z92544.3-201ENST00000624747 417 ntBASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FNDC3AQ9Y2H6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
FNDC3AQ9Y2H6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FNDC3AQ9Y2H6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
FNDC3AQ9Y2H6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FNDC3AQ9Y2H6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 KRT8P48-201ENST00000515599 1220 ntBASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 SLC22A20-204ENST00000530038 1673 ntBASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 DUX4L27-201ENST00000554796 1261 ntBASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 AC099522.2-201ENST00000607001 744 ntBASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 AC026120.1-201ENST00000611536 926 ntBASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FNDC3AQ9Y2H6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 AC131009.4-201ENST00000624048 1740 ntBASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 AC069262.1-201ENST00000539058 672 ntBASIC16.82■□□□□ 0.28
FNDC3AQ9Y2H6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms