Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPO2Q9UMS6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 AGGF1P2-201ENST00000426656 2106 ntBASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 AC087499.6-201ENST00000411576 835 ntBASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 API5-211ENST00000534695 560 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 TP53TG3HP-202ENST00000569755 579 ntBASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 SRD5A3P1-201ENST00000603021 949 ntBASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 KRT8P37-201ENST00000451609 1420 ntBASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPO2Q9UMS6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 AC022211.2-201ENST00000585075 2527 ntBASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 GAPDHP21-201ENST00000450301 1010 ntBASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 AL132655.2-201ENST00000596276 594 ntBASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SYNPO2Q9UMS6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 RRP7BP-205ENST00000566851 833 ntBASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 AC140912.1-201ENST00000577171 1054 ntBASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 AC004461.2-201ENST00000629517 803 ntBASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SYNPO2Q9UMS6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms