Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 INGX-202ENST00000489074 768 ntBASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 SPDYE12P-201ENST00000618416 771 ntBASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CLCF1Q9UBD9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 BANF1P1-201ENST00000553684 263 ntBASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 LINC01144-201ENST00000626198 1710 ntBASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLCF1Q9UBD9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 AC241585.1-201ENST00000433527 519 ntBASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.56□□□□□ -0.08
CLCF1Q9UBD9 HLA-V-204ENST00000476601 1289 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms