Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 AC098850.1-201ENST00000419919 790 ntBASIC16.26■□□□□ 0.19
NCDNQ9UBB6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 AC104596.2-201ENST00000512793 793 ntBASIC16.26■□□□□ 0.19
NCDNQ9UBB6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 MIR4492-201ENST00000581627 80 ntBASIC16.26■□□□□ 0.19
NCDNQ9UBB6 AC010319.3-201ENST00000597028 470 ntBASIC16.26■□□□□ 0.19
NCDNQ9UBB6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 AC243960.2-201ENST00000600996 747 ntBASIC16.26■□□□□ 0.19
NCDNQ9UBB6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 LINC00895-201ENST00000629028 1637 ntBASIC16.26■□□□□ 0.19
NCDNQ9UBB6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCDNQ9UBB6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.25■□□□□ 0.19
NCDNQ9UBB6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 MIR8072-201ENST00000614241 80 ntBASIC16.25■□□□□ 0.19
NCDNQ9UBB6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.25■□□□□ 0.19
NCDNQ9UBB6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
NCDNQ9UBB6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 PDIA3P1-201ENST00000471856 1510 ntBASIC16.24■□□□□ 0.19
NCDNQ9UBB6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 AC233724.13-201ENST00000598383 410 ntBASIC16.24■□□□□ 0.19
NCDNQ9UBB6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 AL033527.5-202ENST00000641632 1098 ntBASIC16.24■□□□□ 0.19
NCDNQ9UBB6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCDNQ9UBB6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms