Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 AC009053.2-201ENST00000563701 2365 ntBASIC15.08■□□□□ 0
LRFN1Q9P244 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.08■□□□□ 0
LRFN1Q9P244 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.08■□□□□ 0
LRFN1Q9P244 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.08■□□□□ 0
LRFN1Q9P244 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRFN1Q9P244 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRFN1Q9P244 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LRFN1Q9P244 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LRFN1Q9P244 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 AL603756.1-201ENST00000606511 2163 ntBASIC15.08■□□□□ 0
LRFN1Q9P244 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
LRFN1Q9P244 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.08■□□□□ 0
LRFN1Q9P244 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRFN1Q9P244 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
LRFN1Q9P244 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.07■□□□□ 0
LRFN1Q9P244 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.07■□□□□ 0
LRFN1Q9P244 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 AL031731.1-201ENST00000642131 2094 ntBASIC15.07■□□□□ 0
LRFN1Q9P244 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 GPAA1P2-202ENST00000606848 1787 ntBASIC15.07■□□□□ 0
LRFN1Q9P244 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.07■□□□□ 0
LRFN1Q9P244 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.07■□□□□ 0
LRFN1Q9P244 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.07■□□□□ 0
LRFN1Q9P244 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 RNA5SP410-201ENST00000516285 106 ntBASIC15.07■□□□□ 0
LRFN1Q9P244 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.07■□□□□ 0
LRFN1Q9P244 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.07■□□□□ 0
LRFN1Q9P244 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.07■□□□□ 0
LRFN1Q9P244 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 AC007967.4-201ENST00000614700 386 ntBASIC15.07■□□□□ 0
LRFN1Q9P244 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 AC005915.1-201ENST00000624912 2018 ntBASIC15.07■□□□□ 0
LRFN1Q9P244 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
LRFN1Q9P244 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.07■□□□□ 0
LRFN1Q9P244 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
LRFN1Q9P244 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
LRFN1Q9P244 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
LRFN1Q9P244 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
LRFN1Q9P244 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.06■□□□□ 0
LRFN1Q9P244 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.06■□□□□ 0
LRFN1Q9P244 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.06■□□□□ 0
LRFN1Q9P244 AC027369.6-201ENST00000525520 931 ntBASIC15.06■□□□□ 0
LRFN1Q9P244 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.06■□□□□ 0
LRFN1Q9P244 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.06■□□□□ 0
LRFN1Q9P244 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.06■□□□□ 0
LRFN1Q9P244 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.06■□□□□ 0
LRFN1Q9P244 AC073592.8-201ENST00000624126 511 ntBASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms