Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 AL627223.1-201ENST00000416693 442 ntBASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 AC005237.2-201ENST00000434368 219 ntBASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 SLC25A39P2-201ENST00000537614 270 ntBASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 AC004835.2-201ENST00000603762 682 ntBASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ECHDC1Q9NTX5 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 FAM58DP-201ENST00000428076 619 ntBASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.97■□□□□ 0.79
ECHDC1Q9NTX5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 DNAJB3-202ENST00000449667 1266 ntBASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 AL691403.2-201ENST00000618460 490 ntBASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ECHDC1Q9NTX5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms