Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 AC079140.1-201ENST00000508039 487 ntBASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 KRT8P48-201ENST00000515599 1220 ntBASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 AC243562.1-201ENST00000560672 389 ntBASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 AC022145.2-201ENST00000598203 171 ntBASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 AC026790.2-201ENST00000606282 430 ntBASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 AL596442.2-201ENST00000610240 980 ntBASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 UBALD1-205ENST00000590891 2641 ntBASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PRDM9Q9NQV7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 CNN2P11-201ENST00000429351 262 ntBASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 AP001160.2-201ENST00000596071 487 ntBASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 AC004835.2-201ENST00000603762 682 ntBASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 OR13I1P-201ENST00000609811 1264 ntBASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRDM9Q9NQV7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 U82695.1-201ENST00000635752 1889 ntBASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRDM9Q9NQV7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms