Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.78■□□□□ 0.12
SLC6A20Q9NP91 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 AL139400.1-201ENST00000366220 510 ntBASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 AC023141.5-201ENST00000458585 616 ntBASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 AC093028.1-201ENST00000622998 982 ntBASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 AC009093.7-201ENST00000623853 1223 ntBASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A20Q9NP91 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A20Q9NP91 AL662844.4-201ENST00000606367 2838 ntBASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 AC092364.2-201ENST00000596710 2692 ntBASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 GPS2P2-201ENST00000430745 888 ntBASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 AC106028.4-201ENST00000614509 607 ntBASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 AL118508.1-201ENST00000613502 2345 ntBASIC15.76■□□□□ 0.11
SLC6A20Q9NP91 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SLC6A20Q9NP91 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC6A20Q9NP91 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A20Q9NP91 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A20Q9NP91 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A20Q9NP91 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A20Q9NP91 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms