Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 PCDHA14-201ENST00000506751 2298 ntBASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 UBALD1-205ENST00000590891 2641 ntBASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 TSSK5P-201ENST00000423978 907 ntBASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 GAPDHP21-201ENST00000450301 1010 ntBASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 PRYP6-201ENST00000514804 343 ntBASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 AP005018.1-201ENST00000525475 301 ntBASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 MST1L-201ENST00000442552 2185 ntBASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF3Q9HD45 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 AC009118.2-201ENST00000613275 655 ntBASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 AL138828.2-201ENST00000615812 383 ntBASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF3Q9HD45 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 FOXO1B-201ENST00000504678 1527 ntBASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.41■□□□□ 0.22
TM9SF3Q9HD45 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms