Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 AC117500.6-201ENST00000624871 588 ntBASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 FAM215A-202ENST00000632077 792 ntBASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 AC005622.1-201ENST00000636801 1703 ntBASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRTM1Q9HBL6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRTM1Q9HBL6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRTM1Q9HBL6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRTM1Q9HBL6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRTM1Q9HBL6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.83■□□□□ 0.13
LRTM1Q9HBL6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRTM1Q9HBL6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
LRTM1Q9HBL6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.83■□□□□ 0.13
LRTM1Q9HBL6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
LRTM1Q9HBL6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
LRTM1Q9HBL6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 CXCL1P1-201ENST00000502804 216 ntBASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.83■□□□□ 0.12
LRTM1Q9HBL6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.82■□□□□ 0.12
LRTM1Q9HBL6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms