Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 AC099398.1-201ENST00000567919 2776 ntBASIC17.84■□□□□ 0.45
HIPK3Q9H422 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 AC074044.1-201ENST00000609673 707 ntBASIC17.84■□□□□ 0.45
HIPK3Q9H422 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 AC092068.3-201ENST00000587894 2016 ntBASIC17.84■□□□□ 0.45
HIPK3Q9H422 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HIPK3Q9H422 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HIPK3Q9H422 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HIPK3Q9H422 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HIPK3Q9H422 PCDHB17P-201ENST00000539533 2393 ntBASIC17.83■□□□□ 0.45
HIPK3Q9H422 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.83■□□□□ 0.45
HIPK3Q9H422 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HIPK3Q9H422 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HIPK3Q9H422 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HIPK3Q9H422 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.83■□□□□ 0.45
HIPK3Q9H422 CLK3P2-201ENST00000427566 1453 ntBASIC17.83■□□□□ 0.45
HIPK3Q9H422 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
HIPK3Q9H422 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HIPK3Q9H422 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HIPK3Q9H422 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HIPK3Q9H422 AC106820.2-201ENST00000563775 3264 ntBASIC17.83■□□□□ 0.44
HIPK3Q9H422 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 BNIP3P42-201ENST00000454982 569 ntBASIC17.83■□□□□ 0.44
HIPK3Q9H422 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 AC104596.2-201ENST00000512793 793 ntBASIC17.83■□□□□ 0.44
HIPK3Q9H422 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 BNIP3P29-201ENST00000598302 571 ntBASIC17.83■□□□□ 0.44
HIPK3Q9H422 AC011447.5-201ENST00000616168 564 ntBASIC17.83■□□□□ 0.44
HIPK3Q9H422 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 CDC14C-201ENST00000428251 1719 ntBASIC17.83■□□□□ 0.44
HIPK3Q9H422 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HIPK3Q9H422 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HIPK3Q9H422 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 CROCCP2-202ENST00000412962 2773 ntBASIC17.82■□□□□ 0.44
HIPK3Q9H422 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 ANKRD19P-201ENST00000338192 862 ntBASIC17.82■□□□□ 0.44
HIPK3Q9H422 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.82■□□□□ 0.44
HIPK3Q9H422 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HIPK3Q9H422 KRT43P-201ENST00000434019 910 ntBASIC17.82■□□□□ 0.44
HIPK3Q9H422 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms