Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.57■□□□□ 0.56
PTPN18Q99952 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.57■□□□□ 0.56
PTPN18Q99952 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
PTPN18Q99952 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.57■□□□□ 0.56
PTPN18Q99952 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTPN18Q99952 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTPN18Q99952 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PTPN18Q99952 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PTPN18Q99952 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN18Q99952 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN18Q99952 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.56■□□□□ 0.56
PTPN18Q99952 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.56■□□□□ 0.56
PTPN18Q99952 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.56■□□□□ 0.56
PTPN18Q99952 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN18Q99952 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
PTPN18Q99952 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.56■□□□□ 0.56
PTPN18Q99952 CLUHP6-201ENST00000580789 941 ntBASIC18.56■□□□□ 0.56
PTPN18Q99952 AC010328.2-201ENST00000597698 1111 ntBASIC18.56■□□□□ 0.56
PTPN18Q99952 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.56■□□□□ 0.56
PTPN18Q99952 AC244669.2-201ENST00000612320 853 ntBASIC18.56■□□□□ 0.56
PTPN18Q99952 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PTPN18Q99952 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PTPN18Q99952 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PTPN18Q99952 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 AC067852.2-201ENST00000590513 2313 ntBASIC18.56■□□□□ 0.56
PTPN18Q99952 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTPN18Q99952 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
PTPN18Q99952 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN18Q99952 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.55■□□□□ 0.56
PTPN18Q99952 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 AC005622.1-201ENST00000636801 1703 ntBASIC18.55■□□□□ 0.56
PTPN18Q99952 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PTPN18Q99952 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PTPN18Q99952 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPN18Q99952 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 AZGP1P1-201ENST00000411909 902 ntBASIC18.55■□□□□ 0.56
PTPN18Q99952 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.55■□□□□ 0.56
PTPN18Q99952 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.55■□□□□ 0.56
PTPN18Q99952 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 RNA5SP423-201ENST00000517127 109 ntBASIC18.55■□□□□ 0.56
PTPN18Q99952 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.55■□□□□ 0.56
PTPN18Q99952 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PTPN18Q99952 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.55■□□□□ 0.56
PTPN18Q99952 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PTPN18Q99952 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PTPN18Q99952 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTPN18Q99952 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN18Q99952 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 YBX1P6-201ENST00000442962 1002 ntBASIC18.54■□□□□ 0.56
PTPN18Q99952 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.54■□□□□ 0.56
PTPN18Q99952 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.54■□□□□ 0.56
PTPN18Q99952 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.54■□□□□ 0.56
PTPN18Q99952 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PTPN18Q99952 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.54■□□□□ 0.56
PTPN18Q99952 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PTPN18Q99952 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms