Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CCL13Q99616 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL13Q99616 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
CCL13Q99616 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.78□□□□□ -0.2
CCL13Q99616 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
CCL13Q99616 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
CCL13Q99616 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL13Q99616 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.78□□□□□ -0.2
CCL13Q99616 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
CCL13Q99616 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.78□□□□□ -0.2
CCL13Q99616 KRT8P48-201ENST00000515599 1220 ntBASIC13.78□□□□□ -0.2
CCL13Q99616 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.78□□□□□ -0.2
CCL13Q99616 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL13Q99616 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL13Q99616 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.78□□□□□ -0.2
CCL13Q99616 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CCL13Q99616 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CCL13Q99616 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.78□□□□□ -0.2
CCL13Q99616 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.78□□□□□ -0.2
CCL13Q99616 AC092364.2-201ENST00000596710 2692 ntBASIC13.77□□□□□ -0.2
CCL13Q99616 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL13Q99616 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CCL13Q99616 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CCL13Q99616 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CCL13Q99616 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CCL13Q99616 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCL13Q99616 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CCL13Q99616 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CCL13Q99616 RPS8P6-201ENST00000426177 609 ntBASIC13.77□□□□□ -0.21
CCL13Q99616 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL13Q99616 ADH5P3-201ENST00000433842 1137 ntBASIC13.77□□□□□ -0.21
CCL13Q99616 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL13Q99616 RN7SL589P-201ENST00000481268 310 ntBASIC13.77□□□□□ -0.21
CCL13Q99616 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.77□□□□□ -0.21
CCL13Q99616 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL13Q99616 AC079140.1-201ENST00000508039 487 ntBASIC13.77□□□□□ -0.21
CCL13Q99616 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL13Q99616 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL13Q99616 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CCL13Q99616 AC243562.1-201ENST00000560672 389 ntBASIC13.77□□□□□ -0.21
CCL13Q99616 AL138918.1-201ENST00000568306 659 ntBASIC13.77□□□□□ -0.21
CCL13Q99616 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL13Q99616 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.77□□□□□ -0.21
CCL13Q99616 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL13Q99616 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CCL13Q99616 AC134684.3-201ENST00000641758 218 ntBASIC13.77□□□□□ -0.21
CCL13Q99616 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
CCL13Q99616 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CCL13Q99616 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.77□□□□□ -0.21
CCL13Q99616 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CCL13Q99616 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CCL13Q99616 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms