Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 AC142381.1-201ENST00000426099 345 ntBASIC13.65□□□□□ -0.22
GAFA1Q96PS6 AC005237.2-201ENST00000434368 219 ntBASIC13.65□□□□□ -0.22
GAFA1Q96PS6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 AP006288.1-201ENST00000446065 395 ntBASIC13.65□□□□□ -0.22
GAFA1Q96PS6 AC004967.1-201ENST00000453589 447 ntBASIC13.65□□□□□ -0.22
GAFA1Q96PS6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GAFA1Q96PS6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
GAFA1Q96PS6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
GAFA1Q96PS6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 UXT-AS1-201ENST00000590504 1525 ntBASIC13.64□□□□□ -0.23
GAFA1Q96PS6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 MIR346-201ENST00000362234 95 ntBASIC13.64□□□□□ -0.23
GAFA1Q96PS6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 SPTSSB-204ENST00000617024 1292 ntBASIC13.64□□□□□ -0.23
GAFA1Q96PS6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GAFA1Q96PS6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms