Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.36■□□□□ 0.37
CASD1Q96PB1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 HLA-A-202ENST00000376806 1854 ntBASIC17.36■□□□□ 0.37
CASD1Q96PB1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.36■□□□□ 0.37
CASD1Q96PB1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CASD1Q96PB1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CASD1Q96PB1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 AC112492.5-201ENST00000421897 457 ntBASIC17.36■□□□□ 0.37
CASD1Q96PB1 TIMM17BP1-201ENST00000545713 516 ntBASIC17.36■□□□□ 0.37
CASD1Q96PB1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CASD1Q96PB1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.36■□□□□ 0.37
CASD1Q96PB1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CASD1Q96PB1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CASD1Q96PB1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CASD1Q96PB1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CASD1Q96PB1 FZD10-202ENST00000539839 3282 ntBASIC17.36■□□□□ 0.37
CASD1Q96PB1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CASD1Q96PB1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 KRT17P8-201ENST00000540749 863 ntBASIC17.35■□□□□ 0.37
CASD1Q96PB1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 AC017083.2-201ENST00000608069 979 ntBASIC17.35■□□□□ 0.37
CASD1Q96PB1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CASD1Q96PB1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.35■□□□□ 0.37
CASD1Q96PB1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASD1Q96PB1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASD1Q96PB1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASD1Q96PB1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASD1Q96PB1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASD1Q96PB1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASD1Q96PB1 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CASD1Q96PB1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 HLA-V-201ENST00000429037 534 ntBASIC17.34■□□□□ 0.37
CASD1Q96PB1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CASD1Q96PB1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CASD1Q96PB1 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.34■□□□□ 0.37
CASD1Q96PB1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms