Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 LINC02560-201ENST00000596379 459 ntBASIC13.39□□□□□ -0.27
ZNF48Q96MX3 AC021097.1-201ENST00000607902 574 ntBASIC13.39□□□□□ -0.27
ZNF48Q96MX3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 AGGF1P2-201ENST00000426656 2106 ntBASIC13.39□□□□□ -0.27
ZNF48Q96MX3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 AC005915.1-201ENST00000624912 2018 ntBASIC13.39□□□□□ -0.27
ZNF48Q96MX3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AP3S2-216ENST00000617003 1561 ntBASIC13.38□□□□□ -0.27
ZNF48Q96MX3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 TCAF2P1-201ENST00000291129 2421 ntBASIC13.38□□□□□ -0.27
ZNF48Q96MX3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AL512638.1-201ENST00000457493 794 ntBASIC13.38□□□□□ -0.27
ZNF48Q96MX3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AC105233.2-201ENST00000523697 349 ntBASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AF228730.5-201ENST00000530288 346 ntBASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AC008761.3-201ENST00000624803 892 ntBASIC13.38□□□□□ -0.27
ZNF48Q96MX3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF48Q96MX3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 FAM207CP-201ENST00000443486 507 ntBASIC13.37□□□□□ -0.27
ZNF48Q96MX3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 KRT18P34-201ENST00000488218 1270 ntBASIC13.37□□□□□ -0.27
ZNF48Q96MX3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF48Q96MX3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms