Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP6Q96FZ7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 AL645929.1-201ENST00000420084 975 ntBASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 AL049597.2-201ENST00000565575 961 ntBASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP6Q96FZ7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AC106881.1-201ENST00000605849 3329 ntBASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AC003669.1-201ENST00000334569 611 ntBASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 RNF126P1-202ENST00000569893 925 ntBASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AC083849.1-201ENST00000615227 514 ntBASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 HYMAI.1-201ENST00000620949 238 ntBASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 TMBIM7P-203ENST00000641617 1718 ntBASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AC020658.6-201ENST00000623564 1870 ntBASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.61■□□□□ 0.25
CHMP6Q96FZ7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 MIR600HG-201ENST00000449175 5984 ntBASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 AL031731.1-201ENST00000642131 2094 ntBASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHMP6Q96FZ7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms