Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 U82695.1-201ENST00000635752 1889 ntBASIC18.97■□□□□ 0.63
CDCA5Q96FF9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.97■□□□□ 0.63
CDCA5Q96FF9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 AP002490.2-201ENST00000524791 560 ntBASIC18.96■□□□□ 0.63
CDCA5Q96FF9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA5Q96FF9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 AC134043.2-201ENST00000624206 2238 ntBASIC18.95■□□□□ 0.62
CDCA5Q96FF9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 ELK2AP-201ENST00000392510 1007 ntBASIC18.95■□□□□ 0.62
CDCA5Q96FF9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 AC134915.1-201ENST00000426461 574 ntBASIC18.95■□□□□ 0.62
CDCA5Q96FF9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.95■□□□□ 0.62
CDCA5Q96FF9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDCA5Q96FF9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA5Q96FF9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA5Q96FF9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA5Q96FF9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA5Q96FF9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CDCA5Q96FF9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDCA5Q96FF9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.94■□□□□ 0.62
CDCA5Q96FF9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms