Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM11Q96F44 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 AC024909.3-201ENST00000611513 2257 ntBASIC17.4■□□□□ 0.38
TRIM11Q96F44 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 LINC02199-201ENST00000506655 2702 ntBASIC17.4■□□□□ 0.38
TRIM11Q96F44 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 HLA-A-201ENST00000376802 1334 ntBASIC17.4■□□□□ 0.38
TRIM11Q96F44 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM11Q96F44 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM11Q96F44 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM11Q96F44 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM11Q96F44 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM11Q96F44 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM11Q96F44 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.38
TRIM11Q96F44 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRIM11Q96F44 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 KRT18P34-201ENST00000488218 1270 ntBASIC17.39■□□□□ 0.37
TRIM11Q96F44 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 AC007950.2-201ENST00000615045 2347 ntBASIC17.39■□□□□ 0.37
TRIM11Q96F44 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRIM11Q96F44 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.39■□□□□ 0.37
TRIM11Q96F44 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms