Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBE2E3Q969T4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 KRT18P58-201ENST00000527480 1120 ntBASIC15.81■□□□□ 0.12
UBE2E3Q969T4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 AL592424.1-201ENST00000563624 1536 ntBASIC15.81■□□□□ 0.12
UBE2E3Q969T4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBE2E3Q969T4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 AL596087.1-201ENST00000400979 1969 ntBASIC15.8■□□□□ 0.12
UBE2E3Q969T4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 REXO1L8P-201ENST00000604378 1897 ntBASIC15.8■□□□□ 0.12
UBE2E3Q969T4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 AC016027.1-202ENST00000607927 1699 ntBASIC15.8■□□□□ 0.12
UBE2E3Q969T4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.8■□□□□ 0.12
UBE2E3Q969T4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms