Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 SPCS2P4-201ENST00000436160 681 ntBASIC14.45□□□□□ -0.1
TMEM54Q969K7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 AC098859.1-201ENST00000502915 1238 ntBASIC14.45□□□□□ -0.1
TMEM54Q969K7 AC079140.1-201ENST00000508039 487 ntBASIC14.45□□□□□ -0.1
TMEM54Q969K7 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 LINC01225-203ENST00000563550 1244 ntBASIC14.45□□□□□ -0.1
TMEM54Q969K7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 FOXO1B-201ENST00000504678 1527 ntBASIC14.45□□□□□ -0.1
TMEM54Q969K7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM54Q969K7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TMEM54Q969K7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 BX842568.4-201ENST00000421222 227 ntBASIC14.44□□□□□ -0.1
TMEM54Q969K7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 TIMM8BP1-201ENST00000452384 211 ntBASIC14.44□□□□□ -0.1
TMEM54Q969K7 YBX1P5-201ENST00000509441 847 ntBASIC14.44□□□□□ -0.1
TMEM54Q969K7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 SPTSSB-204ENST00000617024 1292 ntBASIC14.44□□□□□ -0.1
TMEM54Q969K7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM54Q969K7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TMEM54Q969K7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 MIR346-201ENST00000362234 95 ntBASIC14.43□□□□□ -0.1
TMEM54Q969K7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TMEM54Q969K7 AC142381.1-201ENST00000426099 345 ntBASIC14.43□□□□□ -0.1
TMEM54Q969K7 GPX1P2-201ENST00000429271 606 ntBASIC14.43□□□□□ -0.1
TMEM54Q969K7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.43□□□□□ -0.1
TMEM54Q969K7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms