Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 HCG4-201ENST00000418983 998 ntBASIC15.56■□□□□ 0.08
TM9SF4Q92544 BASP1P1-201ENST00000430708 665 ntBASIC15.56■□□□□ 0.08
TM9SF4Q92544 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 KRT8P48-201ENST00000515599 1220 ntBASIC15.56■□□□□ 0.08
TM9SF4Q92544 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 AL512356.2-201ENST00000546955 174 ntBASIC15.56■□□□□ 0.08
TM9SF4Q92544 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 KRT8P23-201ENST00000560090 1207 ntBASIC15.56■□□□□ 0.08
TM9SF4Q92544 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 Z92544.3-201ENST00000624747 417 ntBASIC15.56■□□□□ 0.08
TM9SF4Q92544 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 AC092068.3-201ENST00000587894 2016 ntBASIC15.56■□□□□ 0.08
TM9SF4Q92544 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 AL662844.4-201ENST00000606367 2838 ntBASIC15.56■□□□□ 0.08
TM9SF4Q92544 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TM9SF4Q92544 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TM9SF4Q92544 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 AC093525.9-201ENST00000624961 1746 ntBASIC15.55■□□□□ 0.08
TM9SF4Q92544 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 AL353732.1-201ENST00000569618 1459 ntBASIC15.55■□□□□ 0.08
TM9SF4Q92544 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 SPDYE7P-202ENST00000420373 878 ntBASIC15.55■□□□□ 0.08
TM9SF4Q92544 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 AJ011932.1-201ENST00000621707 465 ntBASIC15.55■□□□□ 0.08
TM9SF4Q92544 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TM9SF4Q92544 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
TM9SF4Q92544 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM9SF4Q92544 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM9SF4Q92544 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.54■□□□□ 0.08
TM9SF4Q92544 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM9SF4Q92544 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM9SF4Q92544 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.54■□□□□ 0.08
TM9SF4Q92544 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TM9SF4Q92544 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM9SF4Q92544 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM9SF4Q92544 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TM9SF4Q92544 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TM9SF4Q92544 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TM9SF4Q92544 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.54■□□□□ 0.08
TM9SF4Q92544 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.54■□□□□ 0.08
TM9SF4Q92544 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms