Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 MIR7848-201ENST00000617402 101 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 AC005252.2-201ENST00000624630 1141 ntBASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SYNE2Q8WXH0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 LINC00634-202ENST00000505157 222 ntBASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 AC134915.1-201ENST00000426461 574 ntBASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 RN7SL87P-201ENST00000497657 288 ntBASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 NAV1-210ENST00000593583 726 ntBASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SYNE2Q8WXH0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 ACTG1P4-201ENST00000425123 1122 ntBASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 NAP1L6-202ENST00000641404 1222 ntBASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 AL008718.2-201ENST00000609206 1313 ntBASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 NAT9-211ENST00000580632 799 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 HIST3H2BA-201ENST00000436555 524 ntBASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 RN7SL48P-201ENST00000579283 293 ntBASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 AC005618.3-201ENST00000624928 458 ntBASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SYNE2Q8WXH0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 NHP2P1-201ENST00000335274 462 ntBASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SYNE2Q8WXH0 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms