Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 ST20-AS1-201ENST00000560255 4223 ntBASIC10.73□□□□□ -0.69
SMIM11BQ8TCY0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 TSPY14P-201ENST00000303979 915 ntBASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 RBM17P1-201ENST00000453646 1190 ntBASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 AC128688.1-201ENST00000487626 519 ntBASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SMIM11BQ8TCY0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC10.71□□□□□ -0.69
SMIM11BQ8TCY0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms