Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 LINC01144-201ENST00000626198 1710 ntBASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 AC073592.4-201ENST00000623827 446 ntBASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB3IL1Q8TBN0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 AC091607.1-201ENST00000490318 1060 ntBASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 CDC14C-201ENST00000428251 1719 ntBASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 AC112504.1-201ENST00000623415 1841 ntBASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RAB3IL1Q8TBN0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 AC006058.4-201ENST00000624016 1670 ntBASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 AL590787.1-201ENST00000568856 1315 ntBASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 AC099063.4-201ENST00000641099 1602 ntBASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 AL671277.2-201ENST00000458060 996 ntBASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.46■□□□□ 0.23
RAB3IL1Q8TBN0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms