Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PMS2P4-201ENST00000412466 1052 ntBASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 AC021097.1-201ENST00000607902 574 ntBASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCC2Q8TAQ2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 AP006288.1-201ENST00000446065 395 ntBASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 DNAJB3-202ENST00000449667 1266 ntBASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 AL596442.2-201ENST00000610240 980 ntBASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMARCC2Q8TAQ2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 AL592424.1-201ENST00000563624 1536 ntBASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 SNHG9-202ENST00000564014 471 ntBASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 AP001160.2-201ENST00000596071 487 ntBASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCC2Q8TAQ2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms