Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 AL390955.2-201ENST00000603032 514 ntBASIC17.3■□□□□ 0.36
TTC16Q8NEE8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TTC16Q8NEE8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 FO538757.1-201ENST00000623083 1397 ntBASIC17.29■□□□□ 0.36
TTC16Q8NEE8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.29■□□□□ 0.36
TTC16Q8NEE8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 ALG1L8P-201ENST00000533887 760 ntBASIC17.29■□□□□ 0.36
TTC16Q8NEE8 KRT8P23-201ENST00000560090 1207 ntBASIC17.29■□□□□ 0.36
TTC16Q8NEE8 LINC01225-203ENST00000563550 1244 ntBASIC17.29■□□□□ 0.36
TTC16Q8NEE8 MIR4745-201ENST00000577608 62 ntBASIC17.29■□□□□ 0.36
TTC16Q8NEE8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 AP001059.3-201ENST00000619053 235 ntBASIC17.29■□□□□ 0.36
TTC16Q8NEE8 AC008267.7-201ENST00000624570 1194 ntBASIC17.29■□□□□ 0.36
TTC16Q8NEE8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC16Q8NEE8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 AC060834.1-201ENST00000443027 2032 ntBASIC17.28■□□□□ 0.36
TTC16Q8NEE8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 SPDYE14P-201ENST00000442619 822 ntBASIC17.28■□□□□ 0.36
TTC16Q8NEE8 KRT18P34-201ENST00000488218 1270 ntBASIC17.28■□□□□ 0.36
TTC16Q8NEE8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC16Q8NEE8 AP000842.3-202ENST00000569238 1080 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms