Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 PI4KAP1-204ENST00000612579 1703 ntBASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01561Q8N1V8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
LINC01561Q8N1V8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 PMS2P1-201ENST00000431037 1228 ntBASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 SLC22A20-204ENST00000530038 1673 ntBASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01561Q8N1V8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 AC144831.1-201ENST00000573312 2656 ntBASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01561Q8N1V8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms