Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC50Q8IVM0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 MIR4492-201ENST00000581627 80 ntBASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 IFNL4P1-201ENST00000607083 540 ntBASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 AC107918.4-202ENST00000641623 219 ntBASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 PAUPAR-201ENST00000630360 2965 ntBASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 KRT8P39-201ENST00000396270 1433 ntBASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 MTHFR-217ENST00000641820 1569 ntBASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC50Q8IVM0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 AC067930.6-201ENST00000623257 4947 ntBASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 PMS2P1-201ENST00000431037 1228 ntBASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 RPS2P1-201ENST00000434010 821 ntBASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 RPS15P9-201ENST00000494093 319 ntBASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 AC073648.2-201ENST00000510116 352 ntBASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 GGT4P-201ENST00000623672 1708 ntBASIC17.43■□□□□ 0.38
CCDC50Q8IVM0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms