Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 AC010327.5-201ENST00000586923 3061 ntBASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 AC091951.1-201ENST00000512854 2465 ntBASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LYSMD2Q8IV50 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AL359183.1-201ENST00000623796 2132 ntBASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AC141257.4-201ENST00000634557 245 ntBASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AC136944.6-201ENST00000634818 245 ntBASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AC087481.3-201ENST00000602886 1894 ntBASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AC092919.2-201ENST00000623631 1645 ntBASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD2Q8IV50 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD2Q8IV50 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms