Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NPAS4Q8IUM7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 MIR658-201ENST00000385210 100 ntBASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 HIST3H2BA-201ENST00000436555 524 ntBASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 RPS2P32-201ENST00000439199 892 ntBASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 TMEM261P1-201ENST00000604899 340 ntBASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.46■□□□□ 0.39
NPAS4Q8IUM7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
NPAS4Q8IUM7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NPAS4Q8IUM7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NPAS4Q8IUM7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 WFDC1-204ENST00000613603 549 ntBASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NPAS4Q8IUM7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 AL136982.4-201ENST00000437689 1740 ntBASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 AC022210.1-201ENST00000449856 793 ntBASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 AC007389.4-201ENST00000454674 793 ntBASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 RARRES2P5-201ENST00000564013 466 ntBASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.44■□□□□ 0.38
NPAS4Q8IUM7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms