Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LDB1Q86U70 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LDB1Q86U70 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB1Q86U70 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LDB1Q86U70 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LDB1Q86U70 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB1Q86U70 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.43■□□□□ 0.22
LDB1Q86U70 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.43■□□□□ 0.22
LDB1Q86U70 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
LDB1Q86U70 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LDB1Q86U70 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LDB1Q86U70 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.43■□□□□ 0.22
LDB1Q86U70 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.43■□□□□ 0.22
LDB1Q86U70 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.43■□□□□ 0.22
LDB1Q86U70 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB1Q86U70 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.43■□□□□ 0.22
LDB1Q86U70 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.43■□□□□ 0.22
LDB1Q86U70 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB1Q86U70 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LDB1Q86U70 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.43■□□□□ 0.22
LDB1Q86U70 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB1Q86U70 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB1Q86U70 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.42■□□□□ 0.22
LDB1Q86U70 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LDB1Q86U70 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LDB1Q86U70 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LDB1Q86U70 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LDB1Q86U70 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB1Q86U70 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB1Q86U70 AC023274.1-201ENST00000418278 595 ntBASIC16.42■□□□□ 0.22
LDB1Q86U70 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB1Q86U70 AC140658.5-201ENST00000438532 169 ntBASIC16.42■□□□□ 0.22
LDB1Q86U70 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LDB1Q86U70 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.42■□□□□ 0.22
LDB1Q86U70 RNA5SP416-201ENST00000516838 111 ntBASIC16.42■□□□□ 0.22
LDB1Q86U70 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.42■□□□□ 0.22
LDB1Q86U70 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.42■□□□□ 0.22
LDB1Q86U70 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
LDB1Q86U70 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LDB1Q86U70 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.42■□□□□ 0.22
LDB1Q86U70 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LDB1Q86U70 AC010491.1-201ENST00000563101 2797 ntBASIC16.42■□□□□ 0.22
LDB1Q86U70 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LDB1Q86U70 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.41■□□□□ 0.22
LDB1Q86U70 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LDB1Q86U70 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LDB1Q86U70 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LDB1Q86U70 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.41■□□□□ 0.22
LDB1Q86U70 AC016027.1-202ENST00000607927 1699 ntBASIC16.41■□□□□ 0.22
LDB1Q86U70 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LDB1Q86U70 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.41■□□□□ 0.22
LDB1Q86U70 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.41■□□□□ 0.22
LDB1Q86U70 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LDB1Q86U70 AC092474.2-201ENST00000424288 719 ntBASIC16.41■□□□□ 0.22
LDB1Q86U70 AC074386.1-202ENST00000463561 864 ntBASIC16.41■□□□□ 0.22
LDB1Q86U70 POU5F1P6-201ENST00000466990 990 ntBASIC16.41■□□□□ 0.22
LDB1Q86U70 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LDB1Q86U70 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
LDB1Q86U70 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.41■□□□□ 0.22
LDB1Q86U70 PDPK2P-202ENST00000562415 1191 ntBASIC16.41■□□□□ 0.22
LDB1Q86U70 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
LDB1Q86U70 MIR3909-201ENST00000579518 119 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms