Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 GPR53P-205ENST00000457298 1084 ntBASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 AC119751.2-201ENST00000504529 210 ntBASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 AC092337.1-201ENST00000568699 1129 ntBASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAI1Q7Z5J4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAI1Q7Z5J4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAI1Q7Z5J4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 PCGF3-213ENST00000620529 1899 ntBASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 AC008494.3-201ENST00000606615 944 ntBASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 AC099568.2-201ENST00000609194 695 ntBASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAI1Q7Z5J4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 GPAA1P2-202ENST00000606848 1787 ntBASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 TMEM14DP-201ENST00000422205 345 ntBASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 SRD5A3P1-201ENST00000603021 949 ntBASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 AC005052.1-201ENST00000625181 2492 ntBASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAI1Q7Z5J4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms