Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 OLR1-203ENST00000432556 950 ntTSL 2 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 KRT90P-201ENST00000549264 1064 ntBASIC11.24□□□□□ -0.61
CSMD3Q7Z407 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AC005695.3-201ENST00000614522 232 ntBASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AL008638.5-201ENST00000623814 1298 ntBASIC11.24□□□□□ -0.61
CSMD3Q7Z407 CU634019.7-201ENST00000624153 1185 ntBASIC11.24□□□□□ -0.61
CSMD3Q7Z407 FP236241.2-201ENST00000624906 1185 ntBASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AC128714.1-201ENST00000637035 887 ntBASIC11.24□□□□□ -0.61
CSMD3Q7Z407 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AC068587.3-201ENST00000526613 355 ntBASIC11.24□□□□□ -0.61
CSMD3Q7Z407 ENPP7P5-201ENST00000541031 1031 ntBASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AL138688.1-201ENST00000624851 1594 ntBASIC11.24□□□□□ -0.61
CSMD3Q7Z407 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 GGCT-203ENST00000409144 836 ntTSL 2 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 AC138627.1-207ENST00000641560 1006 ntBASIC11.24□□□□□ -0.61
CSMD3Q7Z407 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11.24□□□□□ -0.61
CSMD3Q7Z407 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 AC024267.1-201ENST00000582320 895 ntBASIC11.23□□□□□ -0.61
CSMD3Q7Z407 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 KC6-205ENST00000599934 556 ntTSL 4 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms