Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UBE3BQ7Z3V4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
UBE3BQ7Z3V4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
UBE3BQ7Z3V4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
UBE3BQ7Z3V4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.39■□□□□ 0.86
UBE3BQ7Z3V4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.39■□□□□ 0.86
UBE3BQ7Z3V4 AC020916.1-201ENST00000587762 1774 ntBASIC20.39■□□□□ 0.86
UBE3BQ7Z3V4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UBE3BQ7Z3V4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 FAM207CP-201ENST00000443486 507 ntBASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 TERF1P3-201ENST00000505638 1227 ntBASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 SERBP1P5-201ENST00000510079 1181 ntBASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.39■□□□□ 0.85
UBE3BQ7Z3V4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 COX20P2-201ENST00000452636 358 ntBASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 AC009477.1-201ENST00000452936 217 ntBASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 AC009407.1-201ENST00000568958 598 ntBASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UBE3BQ7Z3V4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 AC087499.5-201ENST00000452760 1342 ntBASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UBE3BQ7Z3V4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 AC008738.7-201ENST00000609744 511 ntBASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.36■□□□□ 0.85
UBE3BQ7Z3V4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms