Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.9■□□□□ 0.62
OTOP1Q7RTM1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
OTOP1Q7RTM1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
OTOP1Q7RTM1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
OTOP1Q7RTM1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 AL391256.1-201ENST00000443260 1855 ntBASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 AC244093.1-201ENST00000610837 814 ntBASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
OTOP1Q7RTM1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 SNX33P1-201ENST00000592116 1762 ntBASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 AC092506.1-202ENST00000401022 528 ntBASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 AC103810.3-201ENST00000583567 96 ntBASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 WFDC1-204ENST00000613603 549 ntBASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 AL671710.1-201ENST00000610245 2349 ntBASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
OTOP1Q7RTM1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
OTOP1Q7RTM1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms