Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 AOC4P-203ENST00000566825 2289 ntBASIC8.94□□□□□ -0.98
LCA10Q71F78 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC8.94□□□□□ -0.98
LCA10Q71F78 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
LCA10Q71F78 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 ASL-204ENST00000395331 1538 ntTSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
LCA10Q71F78 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LCA10Q71F78 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC8.94□□□□□ -0.98
LCA10Q71F78 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
LCA10Q71F78 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC8.93□□□□□ -0.98
LCA10Q71F78 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 AC092117.1-201ENST00000621230 3250 ntBASIC8.93□□□□□ -0.98
LCA10Q71F78 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC8.93□□□□□ -0.98
LCA10Q71F78 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC8.93□□□□□ -0.98
LCA10Q71F78 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC8.93□□□□□ -0.98
LCA10Q71F78 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC8.93□□□□□ -0.98
LCA10Q71F78 AP003041.3-201ENST00000527151 707 ntBASIC8.93□□□□□ -0.98
LCA10Q71F78 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC8.93□□□□□ -0.98
LCA10Q71F78 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC8.93□□□□□ -0.98
LCA10Q71F78 REXO1L10P-201ENST00000615707 1290 ntBASIC8.93□□□□□ -0.98
LCA10Q71F78 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 REXO1L12P-201ENST00000622156 912 ntBASIC8.93□□□□□ -0.98
LCA10Q71F78 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 AC012313.8-201ENST00000595059 5402 ntBASIC8.93□□□□□ -0.98
LCA10Q71F78 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC8.93□□□□□ -0.98
LCA10Q71F78 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
LCA10Q71F78 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
LCA10Q71F78 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms