Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 AL512638.1-201ENST00000457493 794 ntBASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 AJ011932.1-201ENST00000621707 465 ntBASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 AL590560.3-201ENST00000623350 461 ntBASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SWSAP1Q6NVH7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 U82695.1-201ENST00000635752 1889 ntBASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 AC241585.1-201ENST00000433527 519 ntBASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 UGT1A2P-201ENST00000454886 866 ntBASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 AC100757.3-201ENST00000622361 1406 ntBASIC18.23■□□□□ 0.51
SWSAP1Q6NVH7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 MIR4745-201ENST00000577608 62 ntBASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 AL589739.1-201ENST00000607720 493 ntBASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 AL133215.2-201ENST00000609242 977 ntBASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SWSAP1Q6NVH7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms