Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 MED15P5-201ENST00000423150 992 ntBASIC19.66■□□□□ 0.74
RNF20Q5VTR2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 PDPK2P-202ENST00000562415 1191 ntBASIC19.66■□□□□ 0.74
RNF20Q5VTR2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 AC068137.2-201ENST00000605408 478 ntBASIC19.66■□□□□ 0.74
RNF20Q5VTR2 FAM197Y3-203ENST00000618346 717 ntBASIC19.66■□□□□ 0.74
RNF20Q5VTR2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
RNF20Q5VTR2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.66■□□□□ 0.74
RNF20Q5VTR2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 KRT18P3-201ENST00000451602 1288 ntBASIC19.65■□□□□ 0.74
RNF20Q5VTR2 AC074386.1-202ENST00000463561 864 ntBASIC19.65■□□□□ 0.74
RNF20Q5VTR2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.65■□□□□ 0.74
RNF20Q5VTR2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RNF20Q5VTR2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF20Q5VTR2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF20Q5VTR2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RNF20Q5VTR2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 AC140113.2-201ENST00000604370 208 ntBASIC19.64■□□□□ 0.73
RNF20Q5VTR2 AL078644.1-201ENST00000609881 752 ntBASIC19.64■□□□□ 0.73
RNF20Q5VTR2 AL161645.1-201ENST00000622716 1255 ntBASIC19.64■□□□□ 0.73
RNF20Q5VTR2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF20Q5VTR2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF20Q5VTR2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms