Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00242Q5T6M2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 FLJ16779-201ENST00000612722 7638 ntBASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 AC016027.1-202ENST00000607927 1699 ntBASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 LINC00265-3P-201ENST00000447588 903 ntBASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 BX005266.1-201ENST00000473402 457 ntBASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 AC074051.2-201ENST00000565115 352 ntBASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 CYP2A7P1-201ENST00000595391 815 ntBASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 AC092329.2-201ENST00000598402 547 ntBASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 AC005332.1-201ENST00000577698 1310 ntBASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00242Q5T6M2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.6
LINC00242Q5T6M2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.27□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms