Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTC1Q2NKJ3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AL353705.2-201ENST00000428243 662 ntBASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AC011495.1-201ENST00000498085 584 ntBASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AC135586.1-201ENST00000539323 574 ntBASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 RN7SL828P-201ENST00000607615 303 ntBASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AC021097.1-201ENST00000607902 574 ntBASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.53■□□□□ 0.4
CTC1Q2NKJ3 AC131009.4-201ENST00000624048 1740 ntBASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 LINC00895-201ENST00000629028 1637 ntBASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 MIR658-201ENST00000385210 100 ntBASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 MPDU1-223ENST00000582151 728 ntBASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 AL589739.1-201ENST00000607720 493 ntBASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTC1Q2NKJ3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.52■□□□□ 0.39
CTC1Q2NKJ3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTC1Q2NKJ3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTC1Q2NKJ3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CTC1Q2NKJ3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.52■□□□□ 0.39
CTC1Q2NKJ3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 FAM220BP-201ENST00000377689 816 ntBASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 AC022210.1-201ENST00000449856 793 ntBASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 KRT18P34-201ENST00000488218 1270 ntBASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 RAB43P1-201ENST00000561790 589 ntBASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 CHCHD2P3-201ENST00000603038 451 ntBASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CTC1Q2NKJ3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms