Protein–RNA interactions for Protein: Q15223

NECTIN1, Nectin-1, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1Q15223 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN1Q15223 MIR346-201ENST00000362234 95 ntBASIC19.43■□□□□ 0.7
NECTIN1Q15223 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN1Q15223 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN1Q15223 YBX2P1-201ENST00000394192 760 ntBASIC19.43■□□□□ 0.7
NECTIN1Q15223 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN1Q15223 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 KRT8P48-201ENST00000515599 1220 ntBASIC19.43■□□□□ 0.7
NECTIN1Q15223 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 AC027307.2-201ENST00000591252 911 ntBASIC19.43■□□□□ 0.7
NECTIN1Q15223 MIR4321-201ENST00000592276 80 ntBASIC19.43■□□□□ 0.7
NECTIN1Q15223 MTDHP5-201ENST00000598980 586 ntBASIC19.43■□□□□ 0.7
NECTIN1Q15223 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 AC008267.7-201ENST00000624570 1194 ntBASIC19.43■□□□□ 0.7
NECTIN1Q15223 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN1Q15223 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN1Q15223 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN1Q15223 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 CICP6-201ENST00000457191 2729 ntBASIC19.43■□□□□ 0.7
NECTIN1Q15223 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN1Q15223 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.43■□□□□ 0.7
NECTIN1Q15223 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NECTIN1Q15223 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 AC142381.1-201ENST00000426099 345 ntBASIC19.42■□□□□ 0.7
NECTIN1Q15223 MKNK2P1-201ENST00000437526 628 ntBASIC19.42■□□□□ 0.7
NECTIN1Q15223 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 ALG1L5P-201ENST00000482043 771 ntBASIC19.42■□□□□ 0.7
NECTIN1Q15223 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 FAM86C2P-203ENST00000528684 1004 ntBASIC19.42■□□□□ 0.7
NECTIN1Q15223 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 AC026120.1-201ENST00000611536 926 ntBASIC19.42■□□□□ 0.7
NECTIN1Q15223 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.42■□□□□ 0.7
NECTIN1Q15223 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NECTIN1Q15223 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 SPCS2P4-201ENST00000436160 681 ntBASIC19.41■□□□□ 0.7
NECTIN1Q15223 AC245100.5-201ENST00000452108 331 ntBASIC19.41■□□□□ 0.7
NECTIN1Q15223 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 AC098859.1-201ENST00000502915 1238 ntBASIC19.41■□□□□ 0.7
NECTIN1Q15223 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 AC105233.2-201ENST00000523697 349 ntBASIC19.41■□□□□ 0.7
NECTIN1Q15223 AF228730.5-201ENST00000530288 346 ntBASIC19.41■□□□□ 0.7
NECTIN1Q15223 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 SPTSSB-204ENST00000617024 1292 ntBASIC19.41■□□□□ 0.7
NECTIN1Q15223 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NECTIN1Q15223 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NECTIN1Q15223 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms