Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 AC064862.7-201ENST00000604520 867 ntBASIC12.67□□□□□ -0.38
HIST1H1AQ02539 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 AC126177.1-201ENST00000547829 2218 ntBASIC12.67□□□□□ -0.38
HIST1H1AQ02539 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.67□□□□□ -0.38
HIST1H1AQ02539 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 AP002414.1-201ENST00000391405 1147 ntBASIC12.66□□□□□ -0.38
HIST1H1AQ02539 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 HLA-J-202ENST00000469281 1241 ntBASIC12.66□□□□□ -0.38
HIST1H1AQ02539 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 AC091304.2-201ENST00000564639 760 ntBASIC12.66□□□□□ -0.38
HIST1H1AQ02539 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.66□□□□□ -0.38
HIST1H1AQ02539 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HIST1H1AQ02539 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 AL590787.1-201ENST00000568856 1315 ntBASIC12.65□□□□□ -0.38
HIST1H1AQ02539 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 AC006538.1-201ENST00000567905 1585 ntBASIC12.65□□□□□ -0.38
HIST1H1AQ02539 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 KRT8P49-201ENST00000604166 1432 ntBASIC12.65□□□□□ -0.38
HIST1H1AQ02539 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.65□□□□□ -0.38
HIST1H1AQ02539 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms