Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
SNX16P57768 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX16P57768 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX16P57768 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.36■□□□□ 0.37
SNX16P57768 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX16P57768 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.36■□□□□ 0.37
SNX16P57768 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNX16P57768 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SNX16P57768 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.36■□□□□ 0.37
SNX16P57768 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SNX16P57768 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
SNX16P57768 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SNX16P57768 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.36■□□□□ 0.37
SNX16P57768 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SNX16P57768 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNX16P57768 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.36■□□□□ 0.37
SNX16P57768 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNX16P57768 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX16P57768 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX16P57768 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNX16P57768 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX16P57768 TFAMP1-201ENST00000412727 736 ntBASIC17.35■□□□□ 0.37
SNX16P57768 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX16P57768 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNX16P57768 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX16P57768 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.35■□□□□ 0.37
SNX16P57768 AC005829.1-201ENST00000570002 483 ntBASIC17.35■□□□□ 0.37
SNX16P57768 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX16P57768 AL671883.3-201ENST00000603274 991 ntBASIC17.35■□□□□ 0.37
SNX16P57768 AC099522.2-201ENST00000607001 744 ntBASIC17.35■□□□□ 0.37
SNX16P57768 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX16P57768 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNX16P57768 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.35■□□□□ 0.37
SNX16P57768 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SNX16P57768 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SNX16P57768 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX16P57768 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.35■□□□□ 0.37
SNX16P57768 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNX16P57768 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SNX16P57768 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.34■□□□□ 0.37
SNX16P57768 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SNX16P57768 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.34■□□□□ 0.37
SNX16P57768 AL355306.1-201ENST00000415580 579 ntBASIC17.34■□□□□ 0.37
SNX16P57768 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SNX16P57768 HTR5BP-201ENST00000430851 1154 ntBASIC17.34■□□□□ 0.37
SNX16P57768 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
SNX16P57768 AP000347.1-202ENST00000435868 847 ntBASIC17.34■□□□□ 0.37
SNX16P57768 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.34■□□□□ 0.37
SNX16P57768 PRYP6-201ENST00000514804 343 ntBASIC17.34■□□□□ 0.37
SNX16P57768 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.34■□□□□ 0.37
SNX16P57768 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNX16P57768 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.34■□□□□ 0.37
SNX16P57768 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.34■□□□□ 0.37
SNX16P57768 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.34■□□□□ 0.37
SNX16P57768 AC092902.6-201ENST00000641783 218 ntBASIC17.34■□□□□ 0.37
SNX16P57768 MTHFR-217ENST00000641820 1569 ntBASIC17.34■□□□□ 0.37
SNX16P57768 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SNX16P57768 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX16P57768 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.34■□□□□ 0.37
SNX16P57768 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.34■□□□□ 0.37
SNX16P57768 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms