Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.61■□□□□ 0.25
WNT3AP56704 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.61■□□□□ 0.25
WNT3AP56704 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.61■□□□□ 0.25
WNT3AP56704 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.61■□□□□ 0.25
WNT3AP56704 RARRES2P8-201ENST00000566335 367 ntBASIC16.61■□□□□ 0.25
WNT3AP56704 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.61■□□□□ 0.25
WNT3AP56704 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
WNT3AP56704 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WNT3AP56704 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.61■□□□□ 0.25
WNT3AP56704 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
WNT3AP56704 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
WNT3AP56704 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
WNT3AP56704 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.6■□□□□ 0.25
WNT3AP56704 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.6■□□□□ 0.25
WNT3AP56704 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.6■□□□□ 0.25
WNT3AP56704 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.6■□□□□ 0.25
WNT3AP56704 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
WNT3AP56704 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
WNT3AP56704 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 AL355306.1-201ENST00000415580 579 ntBASIC16.6■□□□□ 0.25
WNT3AP56704 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
WNT3AP56704 AL671277.1-201ENST00000429656 993 ntBASIC16.6■□□□□ 0.25
WNT3AP56704 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.6■□□□□ 0.25
WNT3AP56704 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.6■□□□□ 0.25
WNT3AP56704 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 C20orf181-201ENST00000623918 480 ntBASIC16.6■□□□□ 0.25
WNT3AP56704 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.6■□□□□ 0.25
WNT3AP56704 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 U82695.1-201ENST00000635752 1889 ntBASIC16.6■□□□□ 0.25
WNT3AP56704 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
WNT3AP56704 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.6■□□□□ 0.25
WNT3AP56704 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.6■□□□□ 0.25
WNT3AP56704 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WNT3AP56704 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
WNT3AP56704 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.59■□□□□ 0.25
WNT3AP56704 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.59■□□□□ 0.25
WNT3AP56704 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
WNT3AP56704 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
WNT3AP56704 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.59■□□□□ 0.25
WNT3AP56704 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
WNT3AP56704 YBX2P1-201ENST00000394192 760 ntBASIC16.59■□□□□ 0.25
WNT3AP56704 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.59■□□□□ 0.25
WNT3AP56704 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
WNT3AP56704 MTDHP5-201ENST00000598980 586 ntBASIC16.59■□□□□ 0.25
WNT3AP56704 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.59■□□□□ 0.25
WNT3AP56704 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
WNT3AP56704 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.59■□□□□ 0.25
WNT3AP56704 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
WNT3AP56704 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
WNT3AP56704 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.59■□□□□ 0.25
WNT3AP56704 PCDHA1-201ENST00000378133 2726 ntBASIC16.59■□□□□ 0.25
WNT3AP56704 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
WNT3AP56704 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms