Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.24□□□□□ -0.45
CMC4P56277 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CMC4P56277 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.24□□□□□ -0.45
CMC4P56277 ADH5P3-201ENST00000433842 1137 ntBASIC12.24□□□□□ -0.45
CMC4P56277 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.24□□□□□ -0.45
CMC4P56277 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CMC4P56277 AC093724.1-201ENST00000448659 1027 ntBASIC12.24□□□□□ -0.45
CMC4P56277 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.24□□□□□ -0.45
CMC4P56277 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
CMC4P56277 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CMC4P56277 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.24□□□□□ -0.45
CMC4P56277 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.24□□□□□ -0.45
CMC4P56277 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.24□□□□□ -0.45
CMC4P56277 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.24□□□□□ -0.45
CMC4P56277 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.24□□□□□ -0.45
CMC4P56277 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.24□□□□□ -0.45
CMC4P56277 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.24□□□□□ -0.45
CMC4P56277 AC022145.2-201ENST00000598203 171 ntBASIC12.24□□□□□ -0.45
CMC4P56277 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.24□□□□□ -0.45
CMC4P56277 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.24□□□□□ -0.45
CMC4P56277 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
CMC4P56277 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CMC4P56277 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CMC4P56277 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.24□□□□□ -0.45
CMC4P56277 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CMC4P56277 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
CMC4P56277 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CMC4P56277 AC005622.1-201ENST00000636801 1703 ntBASIC12.23□□□□□ -0.45
CMC4P56277 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CMC4P56277 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.23□□□□□ -0.45
CMC4P56277 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
CMC4P56277 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CMC4P56277 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.23□□□□□ -0.45
CMC4P56277 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CMC4P56277 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.23□□□□□ -0.45
CMC4P56277 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CMC4P56277 HLA-H-201ENST00000383620 1096 ntBASIC12.23□□□□□ -0.45
CMC4P56277 SPDYE7P-202ENST00000420373 878 ntBASIC12.23□□□□□ -0.45
CMC4P56277 KRT18P32-201ENST00000424695 1287 ntBASIC12.23□□□□□ -0.45
CMC4P56277 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.23□□□□□ -0.45
CMC4P56277 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.23□□□□□ -0.45
CMC4P56277 SPCS2P4-201ENST00000436160 681 ntBASIC12.23□□□□□ -0.45
CMC4P56277 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.23□□□□□ -0.45
CMC4P56277 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC12.23□□□□□ -0.45
CMC4P56277 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.23□□□□□ -0.45
CMC4P56277 KRT8P48-201ENST00000515599 1220 ntBASIC12.23□□□□□ -0.45
CMC4P56277 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.23□□□□□ -0.45
CMC4P56277 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CMC4P56277 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.23□□□□□ -0.45
CMC4P56277 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.23□□□□□ -0.45
CMC4P56277 AC026979.3-201ENST00000607315 403 ntBASIC12.23□□□□□ -0.45
CMC4P56277 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
CMC4P56277 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CMC4P56277 AC073439.1-201ENST00000624121 1774 ntBASIC12.23□□□□□ -0.45
CMC4P56277 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.22□□□□□ -0.45
CMC4P56277 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.22□□□□□ -0.45
CMC4P56277 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CMC4P56277 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.22□□□□□ -0.45
CMC4P56277 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CMC4P56277 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CMC4P56277 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.22□□□□□ -0.45
CMC4P56277 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 AC004461.1-201ENST00000412461 403 ntBASIC12.22□□□□□ -0.45
CMC4P56277 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.22□□□□□ -0.45
CMC4P56277 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.22□□□□□ -0.45
CMC4P56277 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.22□□□□□ -0.45
CMC4P56277 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.22□□□□□ -0.45
CMC4P56277 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms